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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs113361908 chr10:104978126 T/C 2.31E-7 478 15.27 17.77 10.17 KM Plot
THCA rs113375453 chr10:104746468 C/T 5.22E-9 488 15.2 17.73 32.1 KM Plot
THCA rs11338857 chr1:156925089 CT/C 3.53E-7 486 16.97 14.93 12.17 KM Plot
THCA rs113388793 chr2:201771341 G/A 0.000101 490 16.07 16.3 4.72 KM Plot
THCA rs113411969 chr1:220752336 C/T 2.55E-5 489 15.9 16.8 17.17 KM Plot
THCA rs113430310 chr10:104788826 G/A 5.17E-9 488 15.23 17.68 32.1 KM Plot
THCA rs113463106 chr5:81235183 G/A 0.000262 488 15.9 15 27.82 KM Plot
THCA rs113467834 chr15:83821912 C/T 3.89E-6 483 16.27 15.63 8.9 KM Plot
THCA rs113472579 chr7:76416290 T/G 2.05E-8 481 15.33 17.03 15.67 KM Plot
THCA rs113479786 chr2:48054611 A/G 1.14E-7 487 15.3 17.93 8.27 KM Plot
THCA rs113496286 chr1:16166830 C/T 0.00018 489 15.27 17.33 17.77 KM Plot
THCA rs113503883 chr1:16296953 C/G 1.43E-11 487 15.2 17.93 12.63 KM Plot
THCA rs113529183 chr15:41530908 ATGG/A 0.000251 479 15.17 15.83 17.7 KM Plot
THCA rs113534567 chr6:24456547 C/A 2.55E-7 486 16.37 15.73 7.43 KM Plot
THCA rs113540028 chr9:72004805 G/GT 3.38E-11 486 15.87 17.03 8.83 KM Plot